Choose program to use and database to search:

Program  blastn tblastn tblastx     Database unigenes

Enter here your input data as sequence in FASTA format.   

Or load it from disk

Please read about FASTA format description

Set subsequence: From         To

The query sequence is filtered for low complexity regions by default.

Filter Low complexity Mask for lookup table only

Expect 0.0001 0.01 1 10 100 1000    Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment

Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF

Alignment view Pairwise master-slave with identities master-slave without identities flat master-slave with identities flat master-slave without identities BLAST XML Hit Table

Descriptions 0 10 50 100 250 500    Alignments 0 10 50 100 250 500 Color schema No color schema Color schema 1 Color schema 2 Color schema 3 Color schema 4 Color schema 5 Color schema 6